Turns out the motor was dead. In case anyone has this problem in the future, the replacement motor fits in the housing and works. It is held in by once screw and is very tough to pull out. Solve one problem and create another however. I managed to break most of the clips holding the blower motor assembly to the white hood while wrestling with it to put it back in still am having troubles trying to get them to line up. Tomorrow problems.
Edit: Wow, turns out if you look at the service manual before working on it you will save a ton of time and break way less things. I missed 2 bolts on a bracket beside the door that make life waaaay easier. Now it's working as it was before, just has a couple of zip ties helping hold it together now.